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Resampler

Resampler can be used to transform an LC/MS map into a resampled map.

pot. predecessor tools $ \longrightarrow $ Resampler $ \longrightarrow $ pot. successor tools
- NoiseFilterSGolay

When writing an peak file, all spectra are resampled with a new sampling rate. The number of spectra does not change.

The command line parameters of this tool are:

Resampler -- Transforms an LC/MS map into a resampled map or a PNG image.
Version: 2.0.0 Aug 25 2015, 00:02:58, Revision: GIT-NOTFOUND

Usage:
  Resampler <options>

Options (mandatory options marked with '*'):
  -in <file>*            Input file  (valid formats: 'mzML')
  -out <file>*           Output file in mzML format (valid formats: 'mzML')
  -sampling_rate <rate>  New sampling rate in m/z dimension (default: '0.1' min: '0')
                         
Common TOPP options:
  -ini <file>            Use the given TOPP INI file
  -threads <n>           Sets the number of threads allowed to be used by the TOPP tool (default: '1')
  -write_ini <file>      Writes the default configuration file
  --help                 Shows options
  --helphelp             Shows all options (including advanced)

INI file documentation of this tool:

Legend:
required parameter
advanced parameter
+ResamplerTransforms an LC/MS map into a resampled map or a PNG image.
version2.0.0 Version of the tool that generated this parameters file.
++1Instance '1' section for 'Resampler'
in input file input file*.mzML
out output file in mzML formatoutput file*.mzML
sampling_rate0.1 New sampling rate in m/z dimension0:∞
log Name of log file (created only when specified)
debug0 Sets the debug level
threads1 Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse Disables progress logging to command linetrue,false
forcefalse Overwrite tool specific checks.true,false
testfalse Enables the test mode (needed for internal use only)true,false

OpenMS / TOPP release 2.0.0 Documentation generated on Tue Aug 25 2015 05:53:56 using doxygen 1.8.9.1