35 #ifndef OPENMS_FORMAT_XTANDEMXMLFILE_H
36 #define OPENMS_FORMAT_XTANDEMXMLFILE_H
48 class ProteinIdentification;
90 void startElement(
const XMLCh *
const ,
const XMLCh *
const ,
const XMLCh *
const qname,
const xercesc::Attributes & attributes);
93 void endElement(
const XMLCh *
const ,
const XMLCh *
const ,
const XMLCh *
const qname);
96 void characters(
const XMLCh *
const chars,
const XMLSize_t );
143 #endif // OPENMS_FORMAT_XTANDEMXMLFILE_H
Representation of a protein identification run.
Definition: ProteinIdentification.h:61
String actual_protein_id_
Definition: XTandemXMLFile.h:119
A more convenient string class.
Definition: String.h:57
Map< UInt, std::vector< PeptideHit > > peptide_hits_
Definition: XTandemXMLFile.h:113
bool protein_open_
Definition: XTandemXMLFile.h:107
String tag_
Definition: XTandemXMLFile.h:128
Base class for XML handlers.
Definition: XMLHandler.h:99
ModificationDefinitionsSet mod_def_set_
Definition: XTandemXMLFile.h:137
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
Used to load XTandemXML files.
Definition: XTandemXMLFile.h:58
bool is_description_
Definition: XTandemXMLFile.h:110
Int actual_charge_
Definition: XTandemXMLFile.h:122
Int actual_id_
Definition: XTandemXMLFile.h:125
UInt actual_start_
Definition: XTandemXMLFile.h:131
Representation of a set of modification definitions.
Definition: ModificationDefinitionsSet.h:58
UInt actual_stop_
Definition: XTandemXMLFile.h:134
Map< String, ProteinHit > protein_hits_
Definition: XTandemXMLFile.h:116
ProteinIdentification * protein_identification_
Definition: XTandemXMLFile.h:104
Base class for loading/storing XML files that have a handler derived from XMLHandler.
Definition: XMLFile.h:53
int Int
Signed integer type.
Definition: Types.h:96
Map class based on the STL map (containing several convenience functions)
Definition: Map.h:51