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MzMLValidator.h
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34 
35 #ifndef OPENMS_FORMAT_VALIDATORS_MZMLVALIDATOR_H
36 #define OPENMS_FORMAT_VALIDATORS_MZMLVALIDATOR_H
37 
38 
41 
42 
43 namespace OpenMS
44 {
45  class ControlledVocabulary;
46  namespace Internal
47  {
48 
52  class OPENMS_DLLAPI MzMLValidator :
53  public SemanticValidator
54  {
55 public:
62  MzMLValidator(const CVMappings & mapping, const ControlledVocabulary & cv);
63 
65  virtual ~MzMLValidator();
66 
67 protected:
68 
69  // Docu in base class
70  void startElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname, const xercesc::Attributes & attributes);
71 
72  // Docu in base class
73  virtual String getPath_(UInt remove_from_end = 0) const;
74 
75  // Docu in base class
76  virtual void handleTerm_(const String & path, const CVTerm & parsed_term);
77 
80 
83 
88 
89 private:
90 
92  MzMLValidator();
93 
95  MzMLValidator(const MzMLValidator & rhs);
96 
98  MzMLValidator & operator=(const MzMLValidator & rhs);
99 
100  };
101 
102  } // namespace Internal
103 
104 } // namespace OpenMS
105 
106 #endif
A more convenient string class.
Definition: String.h:57
Semantically validates MzXML files.
Definition: MzMLValidator.h:52
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
Representation of a controlled vocabulary.
Definition: ControlledVocabulary.h:54
String binary_data_type_
Binary data array type.
Definition: MzMLValidator.h:87
String binary_data_array_
Binary data array name.
Definition: MzMLValidator.h:85
Representation of controlled vocabulary term.
Definition: CVTerm.h:51
Map< String, std::vector< CVTerm > > param_groups_
CV terms which can have a value (term => value type)
Definition: MzMLValidator.h:79
String current_id_
Current referenceableParamGroup identifier.
Definition: MzMLValidator.h:82
Semantically validates XML files using CVMappings and a ControlledVocabulary.
Definition: SemanticValidator.h:56
Representation of controlled vocabulary mapping rules (for PSI formats)
Definition: CVMappings.h:57
Map class based on the STL map (containing several convenience functions)
Definition: Map.h:51

OpenMS / TOPP release 2.0.0 Documentation generated on Tue Aug 25 2015 05:53:50 using doxygen 1.8.9.1